Supplementary Content, also known as "Supplementary Material" is content which is supplementary to a document such as additional tables or figures. This content is usually made available online but not in print.
For example, a supplementary figure is available for article 961 from The Plant Journal. The graphic file is named "tpj_961_suppl_fsms1.gif" in accordance with the DTD 4 filenaming convention.
Details of the external file are put in the relatedgroup element of the parent document (tpj_961.xml):
<relatedgroup>
<related relationship="child" type="object">
<file name="tpj_961_suppl_fsms1.gif" type="gif"/>
...
</related>
</relatedgroup>
An explanation of the supplementary content is included in a "supplementary_content" section of the parent document. In this case, the supplementary content is a figure, and so all that is needed in the the supplementary content section is an object element with the legend of the supplementary figure.
<section id="sm1" type="supplementary_content"> <object position="floating" type="figure" id="fsms1"> <objectsource> <file name="tpj_961_suppl_fsms1.gif" type="gif" id="fsms1_source"/> </objectsource> <legend id="fsms1_legend"> <p><span id="fsms1_legend_span"><number>Figure S1. </number>Southern blot analysis of <i>AGT1</i> in <i>Arabidopsis</i>.</span></p> <p>(a) Schematic diagram of the region of <i>Arabidopsis</i> chromosome II containing the <i>AGT1</i> gene. Introns are depicted as lines and exons as boxes. The shaded areas of exons correspond to the portion of the <i>AGT1</i> cDNA used as a probe for DNA and RNA gel-blot analyses. The locations of predicted restriction sites are indicated.</p> <p>(b) Approximately 10 µg genomic <i>Arabidopsis</i> (ecotype C24) DNA was digested with the indicated enzymes, separated by electrophoresis, and transferred to a nylon membrane using standard procedures. The membrane was probed with a <sup>32</sup>P-labeled fragment of the <i>AGT1</i> cDNA. The sizes of known molecular weight markers (in kb) are indicated next to the autoradiograph.</p> </legend> </object> </section>
If there are links to the Supplementary Content in the text, they can be made using the ID of the target object.
<p>Southern blot analysis indicated that a single gene encodes AGT1 in <i>Arabidopsis</i> (Supplementary material, <link rid="fsms1">Figure S1</link>). A BAC clone